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Integrating Benchling: registry, inventory, ELN v1.0.0

Use this resource to automate lab data in Benchling through the SDK or API

New

  • 538 downloads
  • 149 likes
  • 154 saves

Free

Install with the CLI

In a terminal, from the folder you want:

npx --yes palatekit@latest install benchling-lab-data-integration

With no option, the skill goes to ~/.agents/skills/; add --agent claude-code (or codex, cursor…) to target an agent.

First time: connect the CLI with

npx --yes palatekit@latest login

The agent writes calls to the benchling-sdk or the v2 API, starts with a read-only query, then prepares imports or exports. You get integration code and the SDK conventions to follow.

Mostly picked by

Updated November 2, 2026

Card for the “Integrating Benchling: registry, inventory, ELN” skill

Details

Works in
Install guides
Generates with
Your agent's model
Licence
MIT

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What you get

  • SKILL.md: use cases, setup and a read-only query
  • references/: authentication, API endpoints, core capabilities, EventBridge and SDK reference

Good fit for

  • You import FASTA sequences into the Benchling registry
  • You want to audit inventory under a location

Not for

    Tags

    • Benchling
    • laboratory
    • SDK

    About

    You say

    “Import this FASTA file of sequences into Benchling under the Plasmid schema.”

    Card for the “Integrating Benchling: registry, inventory, ELN” skill

    Skill published by k-dense-ai under the MIT license, delivered in its original version.

    Show more

    How to use it

    1. Install the skill in your agent's skills folder
    2. Ask your agent to automate lab data in Benchling through the SDK or API
    3. Review and adjust the result

    Content preview

    Files

    • LICENSE1.1 KB
    • NOTICE-PALATEKIT.md0.5 KB
    • references/api_endpoints.md13.9 KB
    • references/authentication.md6.4 KB
    • references/core_capabilities.md5 KB
    • references/eventbridge.md10.1 KB
    • references/sdk_reference.md12.4 KB
    • SKILL.md8.5 KB

    Origin and licence

    Listed unmodified

    Author
    k-dense-ai
    Source
    github.com/k-dense-ai/scientific-agent-skills/tree/5f2bc0341354fd5590aef76a533ada1e1e5b4e62/skills/benchling-integration
    Licence
    MIT

    Notice

    « benchling-integration » (k-dense-ai, MIT) livré dans sa version d'origine : fiche en français et en anglais par PalateKit.

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