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Gene expression dataset search v1.0.0
Use this resource to find and evaluate gene expression datasets
New
- 445 downloads
- 235 likes
- 175 saves
Free
Install with the CLI
In a terminal, from the folder you want:
npx --yes palatekit@latest install expression-dataset-retrievalWith no option, the skill goes to ~/.agents/skills/; add --agent claude-code (or codex, cursor…) to target an agent.
First time: connect the CLI with
npx --yes palatekit@latest loginThe agent specifies the organism, tissue and experimental design, searches ArrayExpress and BioStudies, then grades the dataset's quality. Queries are run in English.
Mostly picked by
Updated November 2, 2026
Previews
Details
- Install guides
- Generates with
- Your agent's model
- Licence
- Apache-2.0
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What you get
- CHECKLIST.md: fit checklist
- examples.md: example searches
- SKILL.md: disambiguation, search and quality tiers
Good fit for
- You are looking for RNA-seq data on a tissue and condition
- You want to compare case-control studies or time series
Not for
Tags
- gene expression
- RNA-seq
- ArrayExpress
- datasets
About
You say
“Find RNA-seq datasets of mouse liver under fasting.”
Skill published by mims-harvard under the Apache-2.0 license, delivered in its original version.
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How to use it
- Install the skill in your agent's skills folder
- Ask your agent to find and evaluate gene expression datasets
- Review and adjust the result
Content preview
Files
- CHECKLIST.md1.4 KB
- examples.md3.9 KB
- LICENSE11.1 KB
- NOTICE-PALATEKIT.md0.5 KB
- SKILL.md8 KB
Origin and licence
Listed unmodified
- Author
- mims-harvard
- Source
- github.com/mims-harvard/tooluniverse/tree/169d065deeb3e289b3ff36d665529a123bdad791/skills/tooluniverse-expression-data-retrieval
- Licence
- Apache-2.0
Notice
« tooluniverse-expression-data-retrieval » (mims-harvard, Apache-2.0) livré dans sa version d'origine : fiche en français et en anglais par PalateKit.
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