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From GWAS to pathways and drug targets v1.0.0
Use this resource to link GWAS variants to pathways and drug targets
New
- 530 downloads
- 227 likes
- 240 saves
Free
Install with the CLI
In a terminal, from the folder you want:
npx --yes palatekit@latest install gwas-pathway-drug-targetsWith no option, the skill goes to ~/.agents/skills/; add --agent claude-code (or codex, cursor…) to target an agent.
First time: connect the CLI with
npx --yes palatekit@latest loginThe agent maps variants to genes (fine-mapping, eQTL), looks for enriched pathways and assesses the druggability of converging pathways. It computes enrichments rather than describing them.
Mostly picked by
Updated November 2, 2026
Previews
Details
- Install guides
- Generates with
- Your agent's model
- Licence
- Apache-2.0
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What you get
- SKILL.md: disease resolution and GWAS collection
- SKILL.md: variant annotation, enrichment and druggability
Good fit for
- You are looking for pathways disrupted in a disease from GWAS
- You are prioritizing druggable pathways from eQTL signals
Not for
Tags
- GWAS
- pathways
- eQTL
- targets
About
You say
“Which pathways are enriched among the genes of these type 2 diabetes GWAS?”
Skill published by mims-harvard under the Apache-2.0 license, delivered in its original version.
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How to use it
- Install the skill in your agent's skills folder
- Ask your agent to link GWAS variants to pathways and drug targets
- Review and adjust the result
Content preview
Files
- LICENSE11.1 KB
- NOTICE-PALATEKIT.md0.5 KB
- SKILL.md10 KB
Origin and licence
Listed unmodified
- Author
- mims-harvard
- Source
- github.com/mims-harvard/tooluniverse/tree/169d065deeb3e289b3ff36d665529a123bdad791/skills/tooluniverse-pathway-disease-genetics
- Licence
- Apache-2.0
Notice
« tooluniverse-pathway-disease-genetics » (mims-harvard, Apache-2.0) livré dans sa version d'origine : fiche en français et en anglais par PalateKit.
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