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Annotate and prioritize genomic variants v1.0.0
Use this resource to annotate genomic variants and prioritize the important ones
New
- 307 downloads
- 158 likes
- 195 saves
Free
Install with the CLI
In a terminal, from the folder you want:
npx --yes palatekit@latest install genomic-variant-annotationWith no option, the skill goes to ~/.agents/skills/; add --agent claude-code (or codex, cursor…) to target an agent.
First time: connect the CLI with
npx --yes palatekit@latest loginThe agent runs VEP annotation, cross-references variants with ClinVar and gnomAD frequencies, accounts for population differences, then ranks variants by predicted impact. You get a Markdown report with the most important variants.
Mostly picked by
Updated November 2, 2026
Previews
Details
- Install guides
- Generates with
- Your agent's model
- Licence
- MIT
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What you get
- SKILL.md: VEP annotation, ClinVar, frequencies and ancestry-aware filtering
- SKILL.md: impact prioritization (high, moderate, low, modifier) and report template
Good fit for
- You received a VCF file to interpret
- You need to sort rare variants by their likely impact
Not for
Tags
- variants
- vcf
- genomics
- annotation
About
You say
“Annotate this VCF file with VEP and ClinVar, then list the high-impact variants.”
Skill published by aaaaqwq under the MIT license, delivered in its original version.
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How to use it
- Install the skill in your agent's skills folder
- Ask your agent to annotate genomic variants and prioritize the important ones
- Review and adjust the result
Content preview
Files
- LICENSE1.1 KB
- NOTICE-PALATEKIT.md0.5 KB
- SKILL.md1.7 KB
Origin and licence
Listed unmodified
- Author
- aaaaqwq
- Source
- github.com/aaaaqwq/agi-super-team/tree/4c7b20bc52ad8d4a89fa3f5185abc455ef9248de/skills/vcf-annotator
- Licence
- MIT
Notice
« vcf-annotator » (aaaaqwq, MIT) livré dans sa version d'origine : fiche en français et en anglais par PalateKit.
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