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Non-coding regulatory variant interpretation v1.0.0
Use this resource to interpret a non-coding variant or a GWAS signal outside a coding gene
New
- 379 downloads
- 185 likes
- 196 saves
Free
Install with the CLI
In a terminal, from the folder you want:
npx --yes palatekit@latest install noncoding-variant-regulatory-analysisWith no option, the skill goes to ~/.agents/skills/; add --agent claude-code (or codex, cursor…) to target an agent.
First time: connect the CLI with
npx --yes palatekit@latest loginThe agent looks up GWAS associations, eQTLs and the regulatory elements the variant touches, then predicts the sequence-level effect with a deep-learning model when databases are silent.
Mostly picked by
Updated November 2, 2026
Previews
Details
- Install guides
- Generates with
- Your agent's model
- Licence
- Apache-2.0
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What you get
- SKILL.md: association, eQTL and regulatory annotation phases
- SKILL.md: sequence-based triage and deeper prediction
Good fit for
- A GWAS signal falls in an intron or an enhancer
- You are looking for the target gene of an eQTL
Not for
Tags
- non-coding variant
- eQTL
- GWAS
- regulation
About
You say
“Which gene is regulated by this GWAS variant located in an enhancer?”
Skill published by mims-harvard under the Apache-2.0 license, delivered in its original version.
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How to use it
- Install the skill in your agent's skills folder
- Ask your agent to interpret a non-coding variant or a GWAS signal outside a coding gene
- Review and adjust the result
Content preview
Files
- LICENSE11.1 KB
- NOTICE-PALATEKIT.md0.5 KB
- SKILL.md21.8 KB
Origin and licence
Listed unmodified
- Author
- mims-harvard
- Source
- github.com/mims-harvard/tooluniverse/tree/169d065deeb3e289b3ff36d665529a123bdad791/skills/tooluniverse-regulatory-variant-analysis
- Licence
- Apache-2.0
Notice
« tooluniverse-regulatory-variant-analysis » (mims-harvard, Apache-2.0) livré dans sa version d'origine : fiche en français et en anglais par PalateKit.
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